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RECOMB
2004
Springer
15 years 10 months ago
Modeling and Analysis of Heterogeneous Regulation in Biological Networks
Abstract. In this study we propose a novel model for the representation of biological networks and provide algorithms for learning model parameters from experimental data. Our appr...
Irit Gat-Viks, Amos Tanay, Ron Shamir
ICASSP
2009
IEEE
15 years 4 months ago
DNA coding using finite-context models and arithmetic coding
The interest in DNA coding has been growing with the availability of extensive genomic databases. Although only two bits are sufficient to encode the four DNA bases, efficient l...
Armando J. Pinho, António J. R. Neves, Carl...
GFKL
2004
Springer
107views Data Mining» more  GFKL 2004»
15 years 3 months ago
Hierarchical Mixture Models for Nested Data Structures
A hierarchical extension of the finite mixture model is presented that can be used for the analysis of nested data structures. The model permits a simultaneous model-based cluster...
Jeroen K. Vermunt, Jay Magidson
NAR
2000
117views more  NAR 2000»
14 years 9 months ago
The TIGR Gene Indices: reconstruction and representation of expressed gene sequences
Expressed sequence tags (ESTs) have provided a first glimpse of the collection of transcribed sequences in a variety of organisms. However, a careful analysis of this sequence dat...
John Quackenbush, Feng Liang, Ingeborg Holt, Geo P...
ISBI
2004
IEEE
15 years 10 months ago
Outlier Detection for Robust Region-Based Estimation of the Hemodynamic Response Function in Event-Related fMRI
In functional Magnetic Resonance Imaging (fMRI), the Hemodynamic Response Function (HRF) represents the impulse response of the neurovascular system. Its identification is essenti...
Philippe Ciuciu, Alexis Roche, Jérôme...