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BMCBI
2002
137views more  BMCBI 2002»
14 years 9 months ago
ORFer - retrieval of protein sequences and open reading frames from GenBank and storage into relational databases or text files
Background: Functional genomics involves the parallel experimentation with large sets of proteins. This requires management of large sets of open reading frames as a prerequisite ...
Konrad Büssow, Steve Hoffmann, Volker Sievert
BMCBI
2004
142views more  BMCBI 2004»
14 years 9 months ago
GOTree Machine (GOTM): a web-based platform for interpreting sets of interesting genes using Gene Ontology hierarchies
Background: Microarray and other high-throughput technologies are producing large sets of interesting genes that are difficult to analyze directly. Bioinformatics tools are needed...
Bing Zhang, Denise Schmoyer, Stefan Kirov, Jay Sno...
ALIFE
2008
14 years 10 months ago
Hierarchical Self-Organization in the Finitary Process Soup
Current analyses of genomes from numerous species show that the diversity of organism's functional and behavioral characters is not proportional to the number of genes that e...
Olof Görnerup, James P. Crutchfield
NAR
2010
115views more  NAR 2010»
14 years 4 months ago
ChimerDB 2.0 - a knowledgebase for fusion genes updated
Chromosome translocations and gene fusions are frequent events in the human genome and have been found to cause diverse types of tumor. ChimerDB is a knowledgebase of fusion genes...
Pora Kim, Suhyeon Yoon, Namshin Kim, Sanghyun Lee,...
BILDMED
2008
141views Algorithms» more  BILDMED 2008»
14 years 11 months ago
Analysis of Cerebral Blood Flow from Small Rodents
The exact knowledge of the blood vessel geometry plays an important role, not only in clinical applications (stroke diagnosis, detection of stenosis), but also for detailed analysi...
Monika Lehmpfuhl, Manuel André Gaudnek, And...