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SNPD
2004
14 years 11 months ago
Prediction of Protein Dispensability through Integrated Analysis of Multiple-Source High-Throughput Data
Protein dispensability is fundamental to understanding of gene function and evolution. It is usually studied at the individual gene phenotype level. Recent advances in generating ...
Yu Chen, Dong Xu
RECOMB
2003
Springer
15 years 10 months ago
Designing seeds for similarity search in genomic DNA
Large-scale comparison of genomic DNA is of fundamental importance in annotating functional elements of genomes. To perform large comparisons efficiently, BLAST (Methods: Companio...
Jeremy Buhler, Uri Keich, Yanni Sun
75
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BMCBI
2008
126views more  BMCBI 2008»
14 years 9 months ago
ISOL@: an Italian SOLAnaceae genomics resource
Background: Present-day `-omics' technologies produce overwhelming amounts of data which include genome sequences, information on gene expression (transcripts and proteins) a...
Maria Luisa Chiusano, Nunzio D'Agostino, Alessandr...
BMCBI
2010
113views more  BMCBI 2010»
14 years 9 months ago
Unifying generative and discriminative learning principles
Background: The recognition of functional binding sites in genomic DNA remains one of the fundamental challenges of genome research. During the last decades, a plethora of differe...
Jens Keilwagen, Jan Grau, Stefan Posch, Marc Stric...
PKDD
2001
Springer
127views Data Mining» more  PKDD 2001»
15 years 2 months ago
Sentence Filtering for Information Extraction in Genomics, a Classification Problem
In some domains, Information Extraction (IE) from texts requires syntactic and semantic parsing. This analysis is computationally expensive and IE is potentially noisy if it applie...
Claire Nedellec, Mohamed Ould Abdel Vetah, Philipp...