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BMCBI
2007
198views more  BMCBI 2007»
14 years 10 months ago
Correlation analysis reveals the emergence of coherence in the gene expression dynamics following system perturbation
Time course gene expression experiments are a popular means to infer co-expression. Many methods have been proposed to cluster genes or to build networks based on similarity measu...
Nicola Neretti, Daniel Remondini, Marc Tatar, John...
BMCBI
2004
131views more  BMCBI 2004»
14 years 9 months ago
A web services choreography scenario for interoperating bioinformatics applications
Background: Very often genome-wide data analysis requires the interoperation of multiple databases and analytic tools. A large number of genome databases and bioinformatics applic...
Remko de Knikker, Youjun Guo, Jin-long Li, Albert ...
NAR
2007
155views more  NAR 2007»
14 years 9 months ago
AthaMap web tools for the analysis and identification of co-regulated genes
The AthaMap database generates a map of cisregulatory elements for the whole Arabidopsis thaliana genome. This database has been extended by new tools to identify common cis-regul...
Claudia Galuschka, Martin Schindler, Lorenz Bü...
ISMIR
2003
Springer
116views Music» more  ISMIR 2003»
15 years 3 months ago
Harmonic analysis with probabilistic graphical models
A technique for harmonic analysis is presented that partitions a piece of music into contiguous regions and labels each with the key, mode, and functional chord, e.g. tonic, domin...
Christopher Raphael, Josh Stoddard
ISBRA
2010
Springer
14 years 8 months ago
Analysis of Gene Interactions Using Restricted Boolean Networks and Time-Series Data
A popular model for gene regulatory networks is the Boolean network model. In this paper, we propose an algorithm to perform an analysis of gene regulatory interactions using the B...
Carlos H. A. Higa, Vitor H. P. Louzada, Ronaldo Fu...