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NAR
2006
156views more  NAR 2006»
14 years 9 months ago
VOMBAT: prediction of transcription factor binding sites using variable order Bayesian trees
Variable order Markov models and variable order Bayesian trees have been proposed for the recognition of transcription factor binding sites, and it could be demonstrated that they...
Jan Grau, Irad E. Ben-Gal, Stefan Posch, Ivo Gross...
CLADE
2008
IEEE
15 years 4 months ago
SWARM: a scientific workflow for supporting bayesian approaches to improve metabolic models
With the exponential growth of complete genome sequences, the analysis of these sequences is becoming a powerful approach to build genome-scale metabolic models. These models can ...
Xinghua Shi, Rick Stevens
ICDAR
2011
IEEE
13 years 9 months ago
Continuous CRF with Multi-scale Quantization Feature Functions Application to Structure Extraction in Old Newspaper
—We introduce quantization feature functions to represent continuous or large range discrete data into the symbolic CRF data representation. We show that doing this convertion in...
David Hebert, Thierry Paquet, Stéphane Nico...
PAKDD
2005
ACM
184views Data Mining» more  PAKDD 2005»
15 years 3 months ago
Adjusting Mixture Weights of Gaussian Mixture Model via Regularized Probabilistic Latent Semantic Analysis
Mixture models, such as Gaussian Mixture Model, have been widely used in many applications for modeling data. Gaussian mixture model (GMM) assumes that data points are generated fr...
Luo Si, Rong Jin
BMCBI
2007
94views more  BMCBI 2007»
14 years 10 months ago
A Hidden Markov Model to estimate population mixture and allelic copy-numbers in cancers using Affymetrix SNP arrays
Background: Affymetrix SNP arrays can interrogate thousands of SNPs at the same time. This allows us to look at the genomic content of cancer cells and to investigate the underlyi...
Philippe Lamy, Claus L. Andersen, Lars Dyrskjot, N...