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» An event set approach to sequence discovery in medical data
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RECOMB
2008
Springer
15 years 10 months ago
De Novo Sequencing of Nonribosomal Peptides
Abstract. While nonribosomal peptides (NRPs) are of tremendous pharmacological importance, there is currently no technology capable of highthroughput sequencing of NRPs. Difficulti...
Nuno Bandeira, Julio Ng, Dario Meluzzi, Roger G. L...
SAC
2009
ACM
15 years 4 months ago
A new protein motif extraction framework based on constrained co-clustering
Signal finding (pattern discovery) in biological sequences is a fundamental problem in both computer science and molecular biology. Many approaches have been proposed for extract...
Francesca Cordero, Alessia Visconti, Marco Botta
MICCAI
2001
Springer
15 years 2 months ago
Segmentation of Dynamic N-D Data Sets via Graph Cuts Using Markov Models
Abstract. This paper describes a new segmentation technique for multidimensional dynamic data. One example of such data is a perfusion sequence where a number of 3D MRI volumes sho...
Yuri Boykov, Vivian S. Lee, Henry Rusinek, Ravi Ba...
BMCBI
2005
103views more  BMCBI 2005»
14 years 9 months ago
Many accurate small-discriminatory feature subsets exist in microarray transcript data: biomarker discovery
Background: Molecular profiling generates abundance measurements for thousands of gene transcripts in biological samples such as normal and tumor tissues (data points). Given such...
Leslie Grate
BMCBI
2006
115views more  BMCBI 2006»
14 years 9 months ago
Detecting recombination in evolving nucleotide sequences
Background: Genetic recombination can produce heterogeneous phylogenetic histories within a set of homologous genes. These recombination events can be obscured by subsequent resid...
Cheong Xin Chan, Robert G. Beiko, Mark A. Ragan