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» An evolutionary method for complex-process optimization
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104
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BMCBI
2006
116views more  BMCBI 2006»
15 years 17 days ago
Optimized mixed Markov models for motif identification
Background: Identifying functional elements, such as transcriptional factor binding sites, is a fundamental step in reconstructing gene regulatory networks and remains a challengi...
Weichun Huang, David M. Umbach, Uwe Ohler, Leping ...
93
Voted
GECCO
2009
Springer
137views Optimization» more  GECCO 2009»
15 years 4 months ago
Efficient natural evolution strategies
Efficient Natural Evolution Strategies (eNES) is a novel alternative to conventional evolutionary algorithms, using the natural gradient to adapt the mutation distribution. Unlike...
Yi Sun, Daan Wierstra, Tom Schaul, Jürgen Sch...
117
Voted
GECCO
2008
Springer
168views Optimization» more  GECCO 2008»
15 years 1 months ago
Parameterizing pair approximations for takeover dynamics
Pair approximations have often been used to predict equilibrium conditions in spatially-explicit epidemiological and ecological systems. In this work, we investigate whether this ...
Joshua L. Payne, Margaret J. Eppstein
151
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RECOMB
2012
Springer
13 years 2 months ago
Recovering the Tree-Like Trend of Evolution Despite Extensive Lateral Genetic Transfer: A Probabilistic Analysis
Abstract. Lateral gene transfer (LGT) is a common mechanism of nonvertical evolution where genetic material is transferred between two more or less distantly related organisms. It ...
Sebastien Roch, Sagi Snir
COR
2010
150views more  COR 2010»
15 years 19 days ago
Black box scatter search for general classes of binary optimization problems
The purpose of this paper is to apply the scatter search methodology to general classes of binary problems. We focus on optimization problems for which the solutions are represent...
Francisco Gortázar, Abraham Duarte, Manuel ...