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BMCBI
2004
200views more  BMCBI 2004»
14 years 9 months ago
ABC: software for interactive browsing of genomic multiple sequence alignment data
Background: Alignment and comparison of related genome sequences is a powerful method to identify regions likely to contain functional elements. Such analyses are data intensive, ...
Gregory M. Cooper, Senthil A. G. Singaravelu, Aren...
BMCBI
2004
133views more  BMCBI 2004»
14 years 9 months ago
Evaluation of several lightweight stochastic context-free grammars for RNA secondary structure prediction
Background: RNA secondary structure prediction methods based on probabilistic modeling can be developed using stochastic context-free grammars (SCFGs). Such methods can readily co...
Robin D. Dowell, Sean R. Eddy
BMCBI
2004
149views more  BMCBI 2004»
14 years 9 months ago
MiCoViTo: a tool for gene-centric comparison and visualization of yeast transcriptome states
Background: Information obtained by DNA microarray technology gives a rough snapshot of the transcriptome state, i.e., the expression level of all the genes expressed in a cell po...
Gaëlle Lelandais, Philippe Marc, Pierre Vince...
CORR
2004
Springer
177views Education» more  CORR 2004»
14 years 9 months ago
Typestate Checking and Regular Graph Constraints
We introduce regular graph constraints and explore their decidability properties. The motivation for regular graph constraints is 1) type checking of changing types of objects in ...
Viktor Kuncak, Martin C. Rinard
EC
2000
187views ECommerce» more  EC 2000»
14 years 9 months ago
Comparison of Multiobjective Evolutionary Algorithms: Empirical Results
In this paper, we provide a systematic comparison of various evolutionary approaches to multiobjective optimization using six carefully chosen test functions. Each test function i...
Eckart Zitzler, Kalyanmoy Deb, Lothar Thiele
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