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» An ontology for bioinformatics applications
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BIBE
2007
IEEE
145views Bioinformatics» more  BIBE 2007»
15 years 7 months ago
Homomorphisms of Multisource Trees into Networks with Applications to Metabolic Pathways
Network mapping is a convenient tool for comparing and exploring biological networks; it can be used for predicting unknown pathways, fast and meaningful searching of databases, a...
Qiong Cheng, Robert W. Harrison, Alexander Zelikov...
BIBE
2004
IEEE
107views Bioinformatics» more  BIBE 2004»
15 years 5 months ago
Enhanced pClustering and Its Applications to Gene Expression Data
Clustering has been one of the most popular methods to discover useful biological insights from DNA microarray. An interesting paradigm is simultaneous clustering of both genes an...
Sungroh Yoon, Christine Nardini, Luca Benini, Giov...
CSB
2004
IEEE
136views Bioinformatics» more  CSB 2004»
15 years 5 months ago
Minimum Entropy Clustering and Applications to Gene Expression Analysis
Clustering is a common methodology for analyzing the gene expression data. In this paper, we present a new clustering algorithm from an information-theoretic point of view. First,...
Haifeng Li, Keshu Zhang, Tao Jiang
CSB
2005
IEEE
128views Bioinformatics» more  CSB 2005»
15 years 3 months ago
Application of a Generalized MWC Model for the Mathematical Simulation of Metabolic Pathways Regulated by Allosteric Enzymes
In our effort to elucidate the systems biology of the model organism, Escherichia coli, we have developed a mathematical model that simulates the allosteric regulation for threoni...
Tarek S. Najdi, Chin-Rang Yang, Bruce E. Shapiro, ...
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CAINE
2008
15 years 3 months ago
Hierarchical Clustering of Features on Categorical Data of Biomedical Applications
Data mining became increasingly important in bioinformatics and biomedical area during last decade. Various data mining methods, such as association rule mining and clustering, ha...
Yi Lu, Lily R. Liang