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» An ontology for bioinformatics applications
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BIBM
2009
IEEE
113views Bioinformatics» more  BIBM 2009»
15 years 5 months ago
Fast Motif Selection for Biological Sequences
—We consider the problem of identifying motifs, recurring or conserved patterns, in the sets of biological sequences. To solve this task, we present new deterministic and exact a...
Pavel P. Kuksa, Vladimir Pavlovic
153
Voted
COCOA
2008
Springer
15 years 3 months ago
Algorithms and Experimental Study for the Traveling Salesman Problem of Second Order
We introduce a new combinatorial optimization problem, which is a generalization of the Traveling Salesman Problem (TSP) and which we call Traveling Salesman Problem of Second Orde...
Gerold Jäger, Paul Molitor
APVIS
2004
15 years 3 months ago
An Interactive Visualisation for Investigating DNA Sequence Information
1 The sequence of nucleotides that makes up a DNA molecule encodes the characteristics of living things. Bioinformatics offers sophisticated methods to search for and compare nucl...
Paul Rutherford, Clare Churcher, John McCallum
BIBE
2008
IEEE
150views Bioinformatics» more  BIBE 2008»
15 years 1 months ago
Automatic DNA microarray gridding based on Support Vector Machines
This paper presents a novel method for DNA microarray gridding based on Support Vector Machine (SVM) classifiers. It employs a set of soft-margin SVMs to estimate the lines of the ...
Dimitris G. Bariamis, Dimitris Maroulis, Dimitrios...
BMCBI
2008
106views more  BMCBI 2008»
15 years 1 months ago
Integrating biological data - the Distributed Annotation System
Background: The Distributed Annotation System (DAS) is a widely adopted protocol for dynamically integrating a wide range of biological data from geographically diverse sources. D...
Andrew M. Jenkinson, Mario Albrecht, Ewan Birney, ...