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BMCBI
2010
127views more  BMCBI 2010»
14 years 10 months ago
PeptideMine - A webserver for the design of peptides for protein-peptide binding studies derived from protein-protein interactom
Background: Signal transduction events often involve transient, yet specific, interactions between structurally conserved protein domains and polypeptide sequences in target prote...
Khader Shameer, Lalima L. Madan, Shivamurthy Veera...
PKDD
2005
Springer
123views Data Mining» more  PKDD 2005»
15 years 3 months ago
A Multi-metric Index for Euclidean and Periodic Matching
In many classification and data-mining applications the user does not know a priori which distance measure is the most appropriate for the task at hand without examining the produ...
Michail Vlachos, Zografoula Vagena, Vittorio Caste...
RECOMB
2002
Springer
15 years 10 months ago
Probabilistic hierarchical clustering for biological data
Biological data, such as gene expression profiles or protein sequences, is often organized in a hierarchy of classes, where the instances assigned to "nearby" classes in...
Eran Segal, Daphne Koller
BMCBI
2007
174views more  BMCBI 2007»
14 years 10 months ago
ESTuber db: an online database for Tuber borchii EST sequences
Background: The ESTuber database (http://www.itb.cnr.it/estuber) includes 3,271 Tuber borchii expressed sequence tags (EST). The dataset consists of 2,389 sequences from an in-hou...
Barbara Lazzari, Andrea Caprera, Cristian Cosentin...
BMCBI
2008
129views more  BMCBI 2008»
14 years 10 months ago
Triad pattern algorithm for predicting strong promoter candidates in bacterial genomes
Background: Bacterial promoters, which increase the efficiency of gene expression, differ from other promoters by several characteristics. This difference, not yet widely exploite...
Michael Dekhtyar, Amelie Morin, Vehary Sakanyan