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» Analysis of Generalized Pattern Searches
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BMCBI
2006
135views more  BMCBI 2006»
14 years 10 months ago
TF Target Mapper: A BLAST search tool for the identification of Transcription Factor target genes
Background: In the current era of high throughput genomics a major challenge is the genome-wide identification of target genes for specific transcription factors. Chromatin immuno...
Sebastiaan Horsman, Michael J. Moorhouse, Victor C...
CMMR
2003
Springer
101views Music» more  CMMR 2003»
15 years 3 months ago
Automatic Extraction of Approximate Repetitions in Polyphonic Midi Files Based on Perceptive Criteria
In the context of musical analysis, we propose an algorithm that automatically induces patterns from polyphonies. We define patterns as “perceptible repetitions in a musical piec...
Benoit Meudic, Emmanuel Staint-James
DAS
2008
Springer
14 years 11 months ago
Document Image Retrieval to Support Reading Mokkans
This paper presents a design and an implementation of document image retrieval to support reading mokkans. A mokkan is a wooden tablet with text written by a brush in India ink. D...
Akihito Kitadai, Jun Takakura, Masatoshi Ishikawa,...
LISA
2003
14 years 11 months ago
An Analysis of Database-Driven Mail Servers
This paper compares the performance of three different IMAP servers, each of which uses a different storage mechanism: Cyrus uses a database built on BerkeleyDB, Courier-IMAP uses...
Nick Elprin, Bryan Parno
WIA
2007
Springer
15 years 4 months ago
Subset Seed Automaton
We study the pattern matching automaton introduced in [1] for the purpose of seed-based similarity search. We show that our definition provides a compact automaton, much smaller t...
Gregory Kucherov, Laurent Noé, Mikhail A. R...