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» Analysis of Variance for Gene Expression Microarray Data
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BMCBI
2008
147views more  BMCBI 2008»
15 years 18 hour ago
Simple integrative preprocessing preserves what is shared in data sources
Background: Bioinformatics data analysis toolbox needs general-purpose, fast and easily interpretable preprocessing tools that perform data integration during exploratory data ana...
Abhishek Tripathi, Arto Klami, Samuel Kaski
SAC
2010
ACM
14 years 10 months ago
Optimal linear projections for enhancing desired data statistics
Problems involving high-dimensional data, such as pattern recognition, image analysis, and gene clustering, often require a preliminary step of dimension reduction before or durin...
Evgenia Rubinshtein, Anuj Srivastava
BIOINFORMATICS
2006
124views more  BIOINFORMATICS 2006»
14 years 12 months ago
Probabilistic inference of transcription factor concentrations and gene-specific regulatory activities
Motivation Quantitative estimation of the regulatory relationship between transcription factors and genes is a fundamental stepping stone when trying to develop models of cellular...
Guido Sanguinetti, Neil D. Lawrence, Magnus Rattra...
JMLR
2008
209views more  JMLR 2008»
14 years 12 months ago
Bayesian Inference and Optimal Design for the Sparse Linear Model
The linear model with sparsity-favouring prior on the coefficients has important applications in many different domains. In machine learning, most methods to date search for maxim...
Matthias W. Seeger
BMCBI
2008
108views more  BMCBI 2008»
15 years 16 hour ago
SPRINT: A new parallel framework for R
Background: Microarray analysis allows the simultaneous measurement of thousands to millions of genes or sequences across tens to thousands of different samples. The analysis of t...
Jon Hill, Matthew Hambley, Thorsten Forster, Murie...