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» Analysis of variance components in gene expression data
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BMCBI
2010
124views more  BMCBI 2010»
14 years 10 months ago
Comparative analysis of acute and chronic corticosteroid pharmacogenomic effects in rat liver: Transcriptional dynamics and regu
Background: Comprehensively understanding corticosteroid pharmacogenomic effects is an essential step towards an insight into the underlying molecular mechanisms for both benefici...
Tung T. Nguyen, Richard R. Almon, Debra C. DuBois,...
BMCBI
2007
105views more  BMCBI 2007»
14 years 9 months ago
Extended analysis of benchmark datasets for Agilent two-color microarrays
Background: As part of its broad and ambitious mission, the MicroArray Quality Control (MAQC) project reported the results of experiments using External RNA Controls (ERCs) on fiv...
Kathleen F. Kerr
CVPR
2009
IEEE
15 years 1 months ago
Nonlinear Nonnegative Component Analysis
In this paper general solutions for Nonlinear Nonnegative Component Analysis for data representation and recognition are proposed. That is, motivated by a combination of the Nonne...
Stefanos Zafeiriou, Maria Petrou
ICMLA
2008
14 years 11 months ago
Mapping Uncharted Waters: Exploratory Analysis, Visualization, and Clustering of Oceanographic Data
In this paper we describe an interdisciplinary collaboration between researchers in machine learning and oceanography. The collaboration was formed to study the problem of open oc...
Joshua M. Lewis, Pincelli M. Hull, Kilian Q. Weinb...
BMCBI
2008
148views more  BMCBI 2008»
14 years 10 months ago
Automating dChip: toward reproducible sharing of microarray data analysis
Background: During the past decade, many software packages have been developed for analysis and visualization of various types of microarrays. We have developed and maintained the...
Cheng Li