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106
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BMCBI
2010
129views more  BMCBI 2010»
15 years 26 days ago
LAITOR - Literature Assistant for Identification of Terms co-Occurrences and Relationships
Background: Biological knowledge is represented in scientific literature that often describes the function of genes/ proteins (bioentities) in terms of their interactions (biointe...
Adriano Barbosa-Silva, Theodoros G. Soldatos, Ivan...
110
Voted
BMCBI
2008
124views more  BMCBI 2008»
15 years 26 days ago
Inferring modules of functionally interacting proteins using the Bond Energy Algorithm
Background: Non-homology based methods such as phylogenetic profiles are effective for predicting functional relationships between proteins with no considerable sequence or struct...
Ryosuke Watanabe, Enrique Morett, Edgar E. Vallejo
BMCBI
2008
201views more  BMCBI 2008»
15 years 26 days ago
A copula method for modeling directional dependence of genes
Background: Genes interact with each other as basic building blocks of life, forming a complicated network. The relationship between groups of genes with different functions can b...
Jong-Min Kim, Yoon-Sung Jung, Engin A. Sungur, Kap...
93
Voted
BMCBI
2006
140views more  BMCBI 2006»
15 years 24 days ago
SNP-PHAGE - High throughput SNP discovery pipeline
Background: Single nucleotide polymorphisms (SNPs) as defined here are single base sequence changes or short insertion/deletions between or within individuals of a given species. ...
Lakshmi K. Matukumalli, John J. Grefenstette, Davi...
131
Voted
WSDM
2012
ACM
262views Data Mining» more  WSDM 2012»
13 years 8 months ago
Effects of user similarity in social media
There are many settings in which users of a social media application provide evaluations of one another. In a variety of domains, mechanisms for evaluation allow one user to say w...
Ashton Anderson, Daniel P. Huttenlocher, Jon M. Kl...