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» Analyzing time series gene expression data
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SIGMOD
1997
ACM
134views Database» more  SIGMOD 1997»
15 years 1 months ago
Similarity-Based Queries for Time Series Data
We study similarity queries for time series data where similarity is defined in terms of a set of linear transformations on the Fourier series representation of a sequence. We ha...
Davood Rafiei, Alberto O. Mendelzon
JMLR
2011
175views more  JMLR 2011»
14 years 4 months ago
Causal Time Series Analysis of Functional Magnetic Resonance Imaging Data
This review focuses on dynamic causal analysis of functional magnetic resonance (fMRI) data to infer brain connectivity from a time series analysis and dynamical systems perspecti...
Alard Roebroeck, Anil K. Seth, Pedro A. Valdes-Sos...
BMCBI
2006
164views more  BMCBI 2006»
14 years 9 months ago
Evaluation of clustering algorithms for gene expression data
Background: Cluster analysis is an integral part of high dimensional data analysis. In the context of large scale gene expression data, a filtered set of genes are grouped togethe...
Susmita Datta, Somnath Datta
GECCO
2003
Springer
141views Optimization» more  GECCO 2003»
15 years 2 months ago
Finding the Optimal Gene Order in Displaying Microarray Data
The rapid advances of genome-scale sequencing have brought out the necessity of developing new data processing techniques for enormous genomic data. Microarrays, for example, can g...
Seung-Kyu Lee, Yong-Hyuk Kim, Byung Ro Moon
BMCBI
2006
128views more  BMCBI 2006»
14 years 9 months ago
An interactive tool for visualization of relationships between gene expression profiles
Background: Application of phenetic methods to gene expression analysis proved to be a successful approach. Visualizing the results in a 3-dimentional space may further enhance th...
Peter Ruzanov, Steven J. M. Jones