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» Annotating Narratives Using Ontologies and Conceptual Graphs
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BMCBI
2008
184views more  BMCBI 2008»
14 years 9 months ago
Integrating protein-protein interactions and text mining for protein function prediction
Background: Functional annotation of proteins remains a challenging task. Currently the scientific literature serves as the main source for yet uncurated functional annotations, b...
Samira Jaeger, Sylvain Gaudan, Ulf Leser, Dietrich...
BMCBI
2010
201views more  BMCBI 2010»
14 years 6 months ago
IntelliGO: a new vector-based semantic similarity measure including annotation origin
Background: The Gene Ontology (GO) is a well known controlled vocabulary describing the biological process, molecular function and cellular component aspects of gene annotation. I...
Sidahmed Benabderrahmane, Malika Smaïl-Tabbon...
AMKM
2003
Springer
15 years 2 months ago
Integrating External Sources in a Corporate Semantic Web Managed by a Multi-agent System
We first describe a multi-agent system managing a corporate memory in the form of a corporate semantic web. We then focus on a newly introduced society of agents in charge of wrap...
Tuan-Dung Cao, Fabien Gandon
BMCBI
2005
253views more  BMCBI 2005»
14 years 9 months ago
The Use of Edge-Betweenness Clustering to Investigate Biological Function in Protein Interaction Networks
Background: This paper describes an automated method for finding clusters of interconnected proteins in protein interaction networks and retrieving protein annotations associated ...
Ruth Dunn, Frank Dudbridge, Christopher M. Sanders...
BMCBI
2008
119views more  BMCBI 2008»
14 years 9 months ago
Gene Ontology density estimation and discourse analysis for automatic GeneRiF extraction
Background: This paper describes and evaluates a sentence selection engine that extracts a GeneRiF (Gene Reference into Functions) as defined in ENTREZ-Gene based on a MEDLINE rec...
Julien Gobeill, Imad Tbahriti, Frédé...