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ESEC
1995
Springer
15 years 1 months ago
Improvise: Interactive Multimedia Process Visualization Environment
Improvise is a multimedia system for modeling, visualizing and documenting software and business processes. It runs under Microsoft Windows and on most avors of the UNIX operating ...
Naser S. Barghouti, Eleftherios Koutsofios, Edith ...
BMCBI
2011
14 years 4 months ago
Hierarchical graphs for rule-based modeling of biochemical systems
Background: In rule-based modeling, graphs are used to represent molecules: a colored vertex represents a component of a molecule, a vertex attribute represents the internal state...
Nathan W. Lemons, Bin Hu, William S. Hlavacek
NAR
2006
177views more  NAR 2006»
14 years 9 months ago
PUMA2 - grid-based high-throughput analysis of genomes and metabolic pathways
The PUMA2 system (available at http://compbio.mcs. 10 anl.gov/puma2) is an interactive, integrated bioinformatics environment for high-throughput genetic sequence analysis and met...
Natalia Maltsev, Elizabeth M. Glass, Dinanath Sula...
BMCBI
2010
122views more  BMCBI 2010»
14 years 4 months ago
Functional enrichment analyses and construction of functional similarity networks with high confidence function prediction by PF
Background: A new paradigm of biological investigation takes advantage of technologies that produce large high throughput datasets, including genome sequences, interactions of pro...
Troy Hawkins, Meghana Chitale, Daisuke Kihara
ICDM
2009
IEEE
233views Data Mining» more  ICDM 2009»
15 years 4 months ago
Semi-Supervised Sequence Labeling with Self-Learned Features
—Typical information extraction (IE) systems can be seen as tasks assigning labels to words in a natural language sequence. The performance is restricted by the availability of l...
Yanjun Qi, Pavel Kuksa, Ronan Collobert, Kunihiko ...