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BMCBI
2010
116views more  BMCBI 2010»
14 years 10 months ago
permGPU: Using graphics processing units in RNA microarray association studies
Background: Many analyses of microarray association studies involve permutation, bootstrap resampling and crossvalidation, that are ideally formulated as embarrassingly parallel c...
Ivo D. Shterev, Sin-Ho Jung, Stephen L. George, Ko...
KDD
2012
ACM
281views Data Mining» more  KDD 2012»
13 years 8 days ago
Active spectral clustering via iterative uncertainty reduction
Spectral clustering is a widely used method for organizing data that only relies on pairwise similarity measurements. This makes its application to non-vectorial data straightforw...
Fabian L. Wauthier, Nebojsa Jojic, Michael I. Jord...
CLUSTER
2009
IEEE
15 years 4 months ago
Message passing for GPGPU clusters: CudaMPI
—We present and analyze two new communication libraries, cudaMPI and glMPI, that provide an MPI-like message passing interface to communicate data stored on the graphics cards of...
Orion S. Lawlor
IMC
2010
ACM
14 years 7 months ago
High speed network traffic analysis with commodity multi-core systems
Multi-core systems are the current dominant trend in computer processors. However, kernel network layers often do not fully exploit multi-core architectures. This is due to issues...
Francesco Fusco, Luca Deri
COMPGEOM
2006
ACM
15 years 3 months ago
A fast k-means implementation using coresets
In this paper we develop an efficient implementation for a k-means clustering algorithm. The novel feature of our algorithm is that it uses coresets to speed up the algorithm. A ...
Gereon Frahling, Christian Sohler