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BMCBI
2010
116views more  BMCBI 2010»
15 years 1 months ago
permGPU: Using graphics processing units in RNA microarray association studies
Background: Many analyses of microarray association studies involve permutation, bootstrap resampling and crossvalidation, that are ideally formulated as embarrassingly parallel c...
Ivo D. Shterev, Sin-Ho Jung, Stephen L. George, Ko...
KDD
2012
ACM
281views Data Mining» more  KDD 2012»
13 years 3 months ago
Active spectral clustering via iterative uncertainty reduction
Spectral clustering is a widely used method for organizing data that only relies on pairwise similarity measurements. This makes its application to non-vectorial data straightforw...
Fabian L. Wauthier, Nebojsa Jojic, Michael I. Jord...
CLUSTER
2009
IEEE
15 years 8 months ago
Message passing for GPGPU clusters: CudaMPI
—We present and analyze two new communication libraries, cudaMPI and glMPI, that provide an MPI-like message passing interface to communicate data stored on the graphics cards of...
Orion S. Lawlor
IMC
2010
ACM
14 years 11 months ago
High speed network traffic analysis with commodity multi-core systems
Multi-core systems are the current dominant trend in computer processors. However, kernel network layers often do not fully exploit multi-core architectures. This is due to issues...
Francesco Fusco, Luca Deri
COMPGEOM
2006
ACM
15 years 7 months ago
A fast k-means implementation using coresets
In this paper we develop an efficient implementation for a k-means clustering algorithm. The novel feature of our algorithm is that it uses coresets to speed up the algorithm. A ...
Gereon Frahling, Christian Sohler