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USENIX
1994
14 years 11 months ago
Splicing UNIX into a Genome Mapping Laboratory
The Whitehead Institute/MIT Center for Genome Research is responsible for a number of large genome mapping efforts, the scale of which create problems of data and workflow managem...
Lincoln Stein, Andre Marquis, Robert Dredge, Mary ...
BMCBI
2010
142views more  BMCBI 2010»
14 years 9 months ago
Classification of protein sequences by means of irredundant patterns
Background: The classification of protein sequences using string algorithms provides valuable insights for protein function prediction. Several methods, based on a variety of diff...
Matteo Comin, Davide Verzotto
BMCBI
2010
108views more  BMCBI 2010»
14 years 9 months ago
A genetic ensemble approach for gene-gene interaction identification
Background: It has now become clear that gene-gene interactions and gene-environment interactions are ubiquitous and fundamental mechanisms for the development of complex diseases...
Pengyi Yang, Joshua W. K. Ho, Albert Y. Zomaya, Bi...
WABI
2010
Springer
167views Bioinformatics» more  WABI 2010»
14 years 8 months ago
Quantifying the Strength of Natural Selection of a Motif Sequence
Quantification of selective pressures on regulatory sequences is a central question in studying the evolution of gene regulatory networks. Previous methods focus primarily on sing...
Chen-Hsiang Yeang
PASTE
2005
ACM
15 years 3 months ago
Generalizing symbolic execution to library classes
Forward symbolic execution is a program analysis technique that allows using symbolic inputs to explore program executions. The traditional applications of this technique have foc...
Sarfraz Khurshid, Yuk Lai Suen