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    BMCBI
    2005
    130views more  BMCBI 2005»
    Some statistical properties of regulatory DNA sequences, and their use in predicting regulatory regions in the Drosophila genome
    14 years 9 months ago
    Some statistical properties of regulatory DNA sequences, and their use in predicting regulatory regions in the Drosophila genome
    Download  uhra.herts.ac.uk
    Background: This paper addresses the problem of recognising DNA cis-regulatory modules which are located far from genes. Experimental procedures for this are slow and costly, and ...
    Irina I. Abnizova, Rene te Boekhorst, Klaudia Walt...
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    BMCBI
    2005
    137views more  BMCBI 2005»
    A configuration space of homologous proteins conserving mutual information and allowing a phylogeny inference based on pair-wise
    14 years 9 months ago
    A configuration space of homologous proteins conserving mutual information and allowing a phylogeny inference based on pair-wise
    Download  www.biomedcentral.com
    Background: Popular methods to reconstruct molecular phylogenies are based on multiple sequence alignments, in which addition or removal of data may change the resulting tree topo...
    Olivier Bastien, Philippe Ortet, Sylvaine Roy, Eri...
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    BMCBI
    2005
    98views more  BMCBI 2005»
    Iterative approach to model identification of biological networks
    14 years 9 months ago
    Iterative approach to model identification of biological networks
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    Background: Recent advances in molecular biology techniques provide an opportunity for developing detailed mathematical models of biological processes. An iterative scheme is intr...
    Kapil G. Gadkar, Rudiyanto Gunawan, Francis J. Doy...
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    BMCBI
    2005
    113views more  BMCBI 2005»
    PentaPlot: A software tool for the illustration of genome mosaicism
    14 years 9 months ago
    PentaPlot: A software tool for the illustration of genome mosaicism
    Download  www.biomedcentral.com
    Background: Dekapentagonal maps depict the phylogenetic relationships of five genomes in a visually appealing diagram and can be viewed as an alternative to a single evolutionary ...
    Lutz Hamel, Olga Zhaxybayeva, J. Peter Gogarten
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    BMCBI
    2005
    162views more  BMCBI 2005»
    Accelerated probabilistic inference of RNA structure evolution
    14 years 9 months ago
    Accelerated probabilistic inference of RNA structure evolution
    Download  biowiki.org
    Background: Pairwise stochastic context-free grammars (Pair SCFGs) are powerful tools for evolutionary analysis of RNA, including simultaneous RNA sequence alignment and secondary...
    Ian Holmes
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