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ENTCS
2006
128views more  ENTCS 2006»
14 years 9 months ago
Web Verification: Perspective and Challenges
The Web poses novel and interesting problems for both programming language design and verification--and their intersection. This paper provides a personal outline of one thread of...
Shriram Krishnamurthi
ENVSOFT
2006
125views more  ENVSOFT 2006»
14 years 9 months ago
Sensitivity analysis based on regional splits and regression trees (SARS-RT)
A global sensitivity analysis with regional properties is introduced. This method is demonstrated on two synthetic and one hydraulic example. It can be shown that an uncertainty a...
Florian Pappenberger, Ion Iorgulescu, Keith J. Bev...
BMCBI
2007
116views more  BMCBI 2007»
14 years 9 months ago
Linear array of conserved sequence motifs to discriminate protein subfamilies: study on pyridine nucleotide-disulfide reductases
Background: The pyridine nucleotide disulfide reductase (PNDR) is a large and heterogeneous protein family divided into two classes (I and II), which reflect the divergent evoluti...
César L. Avila, Viviana A. Rapisarda, Ricar...
BMCBI
2007
216views more  BMCBI 2007»
14 years 9 months ago
A replica exchange Monte Carlo algorithm for protein folding in the HP model
Background: The ab initio protein folding problem consists of predicting protein tertiary structure from a given amino acid sequence by minimizing an energy function; it is one of...
Chris Thachuk, Alena Shmygelska, Holger H. Hoos
BMCBI
2007
182views more  BMCBI 2007»
14 years 9 months ago
Identifying regulatory targets of cell cycle transcription factors using gene expression and ChIP-chip data
Background: ChIP-chip data, which indicate binding of transcription factors (TFs) to DNA regions in vivo, are widely used to reconstruct transcriptional regulatory networks. Howev...
Wei-Sheng Wu, Wen-Hsiung Li, Bor-Sen Chen
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