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BMCBI
2005
167views more  BMCBI 2005»
13 years 6 months ago
Cross-platform analysis of cancer microarray data improves gene expression based classification of phenotypes
Background: The extensive use of DNA microarray technology in the characterization of the cell transcriptome is leading to an ever increasing amount of microarray data from cancer...
Patrick Warnat, Roland Eils, Benedikt Brors
IBPRIA
2007
Springer
13 years 10 months ago
Random Forest for Gene Expression Based Cancer Classification: Overlooked Issues
Random forest is a collection (ensemble) of decision trees. It is a popular ensemble technique in pattern recognition. In this article, we apply random forest for cancer classifica...
Oleg Okun, Helen Priisalu
BMCBI
2005
190views more  BMCBI 2005»
13 years 6 months ago
An Entropy-based gene selection method for cancer classification using microarray data
Background: Accurate diagnosis of cancer subtypes remains a challenging problem. Building classifiers based on gene expression data is a promising approach; yet the selection of n...
Xiaoxing Liu, Arun Krishnan, Adrian Mondry
CIBCB
2007
IEEE
13 years 10 months ago
Associative Artificial Neural Network for Discovery of Highly Correlated Gene Groups Based on Gene Ontology and Gene Expression
Abstract-- The advance of high-throughput experimental technologies poses continuous challenges to computational data analysis in functional and comparative genomics studies. Gene ...
Ji He, Xinbin Dai, Xuechun Zhao
KDD
2005
ACM
130views Data Mining» more  KDD 2005»
14 years 6 months ago
Simple and effective visual models for gene expression cancer diagnostics
In the paper we show that diagnostic classes in cancer gene expression data sets, which most often include thousands of features (genes), may be effectively separated with simple ...
Gregor Leban, Minca Mramor, Ivan Bratko, Blaz Zupa...