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» Approximate String Matching: A Simpler Faster Algorithm
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DEBU
2010
108views more  DEBU 2010»
14 years 11 months ago
Weighted Set-Based String Similarity
Consider a universe of tokens, each of which is associated with a weight, and a database consisting of strings that can be represented as subsets of these tokens. Given a query st...
Marios Hadjieleftheriou, Divesh Srivastava
CORR
2011
Springer
198views Education» more  CORR 2011»
14 years 6 months ago
Pattern matching in Lempel-Ziv compressed strings: fast, simple, and deterministic
Countless variants of the Lempel-Ziv compression are widely used in many real-life applications. This paper is concerned with a natural modification of the classical pattern match...
Pawel Gawrychowski
97
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ICDE
2010
IEEE
262views Database» more  ICDE 2010»
15 years 11 months ago
Approximate String Search in Spatial Databases
Abstract-- This work presents a novel index structure, MHRtree, for efficiently answering approximate string match queries in large spatial databases. The MHR-tree is based on the ...
Bin Yao, Feifei Li, Marios Hadjieleftheriou, Kun H...
ISMB
1998
15 years 1 months ago
Compression of Strings with Approximate Repeats
We describe a model for strings of characters that is loosely based on the Lempel Ziv model with the addition that a repeated substring can be an approximate match to the original...
Lloyd Allison, Timothy Edgoose, Trevor I. Dix
SIGMOD
2011
ACM
150views Database» more  SIGMOD 2011»
14 years 2 months ago
WHAM: a high-throughput sequence alignment method
Over the last decade the cost of producing genomic sequences has dropped dramatically due to the current so called “next-gen” sequencing methods. However, these next-gen seque...
Yinan Li, Allison Terrell, Jignesh M. Patel