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» Approximate zero-variance simulation
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229
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POPL
2006
ACM
16 years 3 months ago
A hierarchical model of data locality
In POPL 2002, Petrank and Rawitz showed a universal result-finding optimal data placement is not only NP-hard but also impossible to approximate within a constant factor if P = NP...
Chengliang Zhang, Chen Ding, Mitsunori Ogihara, Yu...
135
Voted
RECOMB
2007
Springer
16 years 3 months ago
Free Energy Estimates of All-Atom Protein Structures Using Generalized Belief Propagation
We present a technique for approximating the free energy of protein structures using Generalized Belief Propagation (GBP). The accuracy and utility of these estimates are then demo...
Hetunandan Kamisetty, Eric P. Xing, Christopher Ja...
106
Voted
RECOMB
2004
Springer
16 years 3 months ago
The Statistical Significance of Max-Gap Clusters
Identifying gene clusters, genomic regions that share local similarities in gene organization, is a prerequisite for many different types of genomic analyses, including operon pred...
Rose Hoberman, David Sankoff, Dannie Durand
121
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STOC
2003
ACM
188views Algorithms» more  STOC 2003»
16 years 3 months ago
Almost random graphs with simple hash functions
We describe a simple randomized construction for generating pairs of hash functions h1, h2 from a universe U to ranges V = [m] = {0, 1, . . . , m - 1} and W = [m] so that for ever...
Martin Dietzfelbinger, Philipp Woelfel
204
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SIGMOD
2006
ACM
149views Database» more  SIGMOD 2006»
16 years 2 months ago
Efficient query processing on unstructured tetrahedral meshes
Modern scientific applications consume massive volumes of data produced by computer simulations. Such applications require new data management capabilities in order to scale to te...
Stratos Papadomanolakis, Anastassia Ailamaki, Juli...