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RECOMB
2000
Springer
15 years 7 months ago
A compression algorithm for DNA sequences and its applications in genome comparison
We present a lossless compression algorithm, GenCompress, for genetic sequences, based on searching for approximate repeats. Our algorithm achieves the best compression ratios for...
Xin Chen, Sam Kwong, Ming Li
CCCG
2010
15 years 5 months ago
3d local algorithm for dominating sets of unit disk graphs
A dominating set of a graph G = (V, E) is a subset V V of the nodes such that for all nodes v V , either v V or a neighbor u of v is in V . Several routing protocols in ad hoc ...
Alaa Eddien Abdallah, Thomas Fevens, Jaroslav Opat...
SODA
2010
ACM
181views Algorithms» more  SODA 2010»
15 years 2 months ago
Near-Optimal Sublinear Time Algorithms for Ulam Distance
We give near-tight bounds for estimating the edit distance between two non-repetitive strings (Ulam distance) with constant approximation, in sub-linear time. For two strings of l...
Alexandr Andoni, Huy L. Nguyen
STOC
2005
ACM
143views Algorithms» more  STOC 2005»
15 years 9 months ago
On strip packing With rotations
We present an asymptotic fully polynomial time approximation scheme for two-dimensional strip packing with rotations. In this problem, a set of rectangles need to be packed into a...
Klaus Jansen, Rob van Stee
CDC
2008
IEEE
148views Control Systems» more  CDC 2008»
15 years 10 months ago
Convergence rate for stochastic consensus algorithms with time-varying noise statistics: Asymptotic normality
— This paper studies consensus seeking over noisy networks with time-varying noise statistics. Stochastic approximation type algorithms can ensure consensus in mean square and wi...
Minyi Huang