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» Approximation algorithms for aligning points
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GECCO
2003
Springer
128views Optimization» more  GECCO 2003»
15 years 2 months ago
Evolving Consensus Sequence for Multiple Sequence Alignment with a Genetic Algorithm
In this paper we present an approach that evolves the consensus sequence [25] for multiple sequence alignment (MSA) with genetic algorithm (GA). We have developed an encoding schem...
Conrad Shyu, James A. Foster
BMCBI
2008
140views more  BMCBI 2008»
14 years 9 months ago
Improved accuracy of multiple ncRNA alignment by incorporating structural information into a MAFFT-based framework
Background: Structural alignment of RNAs is becoming important, since the discovery of functional non-coding RNAs (ncRNAs). Recent studies, mainly based on various approximations ...
Kazutaka Katoh, Hiroyuki Toh
SOFSEM
2007
Springer
15 years 3 months ago
Fast Approximate Point Set Matching for Information Retrieval
We investigate randomised algorithms for subset matching with spatial point sets—given two sets of d-dimensional points: a data set T consisting of n points and a pattern P consi...
Raphaël Clifford, Benjamin Sach
GBRPR
2005
Springer
15 years 3 months ago
Approximating the Problem, not the Solution: An Alternative View of Point Set Matching
This work discusses the issue of approximation in point set matching problems. In general, one may have two classes of approximations when tackling a matching problem: a representa...
Tibério S. Caetano, Terry Caelli
DAGSTUHL
1997
14 years 11 months ago
Interpolation and Approximation of Surfaces from Three-dimensional Scattered Data Points
There is a wide range of applications for which surface interpolation or approximation from scattered data points in space is important. Dependent on the field of application and...
Robert Mencl, Heinrich Müller