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BMCBI
2011
14 years 5 months ago
Tree Pruner: An efficient tool for selecting data from a biased genetic database
Background: Large databases of genetic data are often biased in their representation. Thus, selection of genetic data with desired properties, such as evolutionary representation ...
Mohan Krishnamoorthy, Pragneshkumar Patel, Mira Di...
BMCBI
2011
14 years 5 months ago
Support vector machines-based identification of alternative splicing in Arabidopsis thaliana from whole-genome tiling arrays
Background: Alternative splicing (AS) is a process which generates several distinct mRNA isoforms from the same gene by splicing different portions out of the precursor transcript...
Johannes Eichner, Georg Zeller, Sascha Laubinger, ...
BMCBI
2011
14 years 5 months ago
An Agent-Based Model to study the epidemiological and evolutionary dynamics of Influenza viruses
Background: Influenza A viruses exhibit complex epidemiological patterns in a number of mammalian and avian hosts. Understanding transmission of these viruses necessitates taking ...
Benjamin Roche, John M. Drake, Pejman Rohani
TSP
2010
14 years 4 months ago
Shrinkage algorithms for MMSE covariance estimation
We address covariance estimation in the sense of minimum mean-squared error (MMSE) when the samples are Gaussian distributed. Specifically, we consider shrinkage methods which are ...
Yilun Chen, Ami Wiesel, Yonina C. Eldar, Alfred O....
TSP
2010
14 years 4 months ago
Compressed sensing performance bounds under Poisson noise
Abstract--This paper describes performance bounds for compressed sensing (CS) where the underlying sparse or compressible (sparsely approximable) signal is a vector of nonnegative ...
Maxim Raginsky, Rebecca Willett, Zachary T. Harman...