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TVCG
2008
151views more  TVCG 2008»
14 years 9 months ago
Visualization of Particle Interactions in Granular Media
Interaction between particles in so-called granular media, such as soil and sand, plays an important role in the context of geomechanical phenomena and numerous industrial applicat...
Holger A. Meier, Michael Schlemmer, Christian Wagn...
ALGORITHMICA
2002
97views more  ALGORITHMICA 2002»
14 years 9 months ago
Testing and Spot-Checking of Data Streams
Abstract. We consider the tasks of testing and spot-checking for data streams. These testers and spotcheckers are potentially useful in real-time or near real-time applications tha...
Joan Feigenbaum, Sampath Kannan, Martin Strauss, M...
BMCBI
2004
208views more  BMCBI 2004»
14 years 9 months ago
Using 3D Hidden Markov Models that explicitly represent spatial coordinates to model and compare protein structures
Background: Hidden Markov Models (HMMs) have proven very useful in computational biology for such applications as sequence pattern matching, gene-finding, and structure prediction...
Vadim Alexandrov, Mark Gerstein
BMCBI
2004
125views more  BMCBI 2004»
14 years 9 months ago
A functional hierarchical organization of the protein sequence space
Background: It is a major challenge of computational biology to provide a comprehensive functional classification of all known proteins. Most existing methods seek recurrent patte...
Noam Kaplan, Moriah Friedlich, Menachem Fromer, Mi...
JCB
2000
146views more  JCB 2000»
14 years 9 months ago
Bayesian Segmentation of Protein Secondary Structure
We present a novel method for predicting the secondary structure of a protein from its amino acid sequence. Most existing methods predict each position in turn based on a local wi...
Scott C. Schmidler, Jun S. Liu, Douglas L. Brutlag