: We investigate the parallel scaling of the GROMACS molecular dynamics code on Ethernet Beowulf clusters and what prerequisites are necessary for decent scaling even on such clust...
Carsten Kutzner, David van der Spoel, Martin Fechn...
Abstract. Today’s large finite element simulations require parallel algorithms to scale on clusters with thousands or tens of thousands of processor cores. We present data struc...
Timo Heister, Martin Kronbichler, Wolfgang Bangert...
The ability to characterize visualizations would bring several benefits to the design process. It would help designers to assess their designs, reuse existing designs in new contex...
This paper presents a high-level approach for assessing the performance behavior of complex scientific applications running on a high-performance system through simulation. The pr...
Thomas Fahringer, Nicola Mazzocca, Massimiliano Ra...
Background: Microarray analysis allows the simultaneous measurement of thousands to millions of genes or sequences across tens to thousands of different samples. The analysis of t...
Jon Hill, Matthew Hambley, Thorsten Forster, Murie...