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ISMB
2000
14 years 11 months ago
Mining for Putative Regulatory Elements in the Yeast Genome Using Gene Expression Data
We have developed a set of methods and tools for automatic discovery of putative regulatory signals in genome sequences. The analysis pipeline consists of gene expression data clu...
Jaak Vilo, Alvis Brazma, Inge Jonassen, Alan J. Ro...
JOCN
2010
70views more  JOCN 2010»
14 years 8 months ago
Optimizing Design Efficiency of Free Recall Events for fMRI
■ Free recall is a fundamental paradigm for studying memory retrieval in the context of minimal cue support. Accordingly, free recall has been extensively studied using behavior...
Ilke Öztekin, Nicole M. Long, David Badre
BMCBI
2008
117views more  BMCBI 2008»
14 years 9 months ago
New resampling method for evaluating stability of clusters
Background: Hierarchical clustering is a widely applied tool in the analysis of microarray gene expression data. The assessment of cluster stability is a major challenge in cluste...
Irina Gana Dresen, Tanja Boes, Johannes Hüsin...
BMCBI
2005
189views more  BMCBI 2005»
14 years 9 months ago
A sentence sliding window approach to extract protein annotations from biomedical articles
Background: Within the emerging field of text mining and statistical natural language processing (NLP) applied to biomedical articles, a broad variety of techniques have been deve...
Martin Krallinger, Maria Padron, Alfonso Valencia
FMICS
2008
Springer
14 years 11 months ago
Dynamic Event-Based Runtime Monitoring of Real-Time and Contextual Properties
Given the intractability of exhaustively verifying software, the use of runtime-verification, to verify single execution paths at runtime, is becoming popular. Although the use of ...
Christian Colombo, Gordon J. Pace, Gerardo Schneid...