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    BMCBI
    2008
    140views more  BMCBI 2008»
    Improved accuracy of multiple ncRNA alignment by incorporating structural information into a MAFFT-based framework
    14 years 11 months ago
    Improved accuracy of multiple ncRNA alignment by incorporating structural information into a MAFFT-based framework
    Download  www.biomedcentral.com
    Background: Structural alignment of RNAs is becoming important, since the discovery of functional non-coding RNAs (ncRNAs). Recent studies, mainly based on various approximations ...
    Kazutaka Katoh, Hiroyuki Toh
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    JCB
    2006
    126views more  JCB 2006»
    Combinatorics of Saturated Secondary Structures of RNA
    14 years 11 months ago
    Combinatorics of Saturated Secondary Structures of RNA
    Download  clavius.bc.edu
    Following Zuker (1986), a saturated secondary structure for a given RNA sequence is a secondary structure such that no base pair can be added without violating the definition of s...
    P. Clote
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    BIOINFORMATICS
    2007
    33views more  BIOINFORMATICS 2007»
    Murlet: a practical multiple alignment tool for structural RNA sequences
    14 years 11 months ago
    Murlet: a practical multiple alignment tool for structural RNA sequences
    Download  www.jsbi.org
    Hisanori Kiryu, Yasuo Tabei, Taishin Kin, Kiyoshi ...
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    BMCBI
    2008
    62views more  BMCBI 2008»
    A fast structural multiple alignment method for long RNA sequences
    14 years 11 months ago
    A fast structural multiple alignment method for long RNA sequences
    Download  repository.dl.itc.u-tokyo.ac.jp
    Yasuo Tabei, Hisanori Kiryu, Taishin Kin, Kiyoshi ...
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    BIOINFORMATICS
    2006
    73views more  BIOINFORMATICS 2006»
    SCARNA: fast and accurate structural alignment of RNA sequences by matching fixed-length stem fragments
    14 years 11 months ago
    SCARNA: fast and accurate structural alignment of RNA sequences by matching fixed-length stem fragments
    Download  www.kyb.mpg.de
    Yasuo Tabei, Koji Tsuda, Taishin Kin, Kiyoshi Asai
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