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» Automated Approaches for Classifying Structures
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CLA
2007
15 years 3 months ago
An FDP-Algorithm for Drawing Lattices
In this work we want to discuss an algorithm for drawing line diagrams of lattices based on force directed placement (FDP). This widely used technique in graph drawing introduces f...
Christian Zschalig
BMCBI
2010
131views more  BMCBI 2010»
15 years 2 months ago
FACT: Functional annotation transfer between proteins with similar feature architectures
Background: The increasing number of sequenced genomes provides the basis for exploring the genetic and functional diversity within the tree of life. Only a tiny fraction of the e...
Tina Koestler, Arndt von Haeseler, Ingo Ebersberge...
CORR
2006
Springer
153views Education» more  CORR 2006»
15 years 2 months ago
Genetic Programming, Validation Sets, and Parsimony Pressure
Fitness functions based on test cases are very common in Genetic Programming (GP). This process can be assimilated to a learning task, with the inference of models from a limited n...
Christian Gagné, Marc Schoenauer, Marc Pari...
SIGIR
2008
ACM
15 years 1 months ago
Deep classification in large-scale text hierarchies
Most classification algorithms are best at categorizing the Web documents into a few categories, such as the top two levels in the Open Directory Project. Such a classification me...
Gui-Rong Xue, Dikan Xing, Qiang Yang, Yong Yu
BMCBI
2005
122views more  BMCBI 2005»
15 years 1 months ago
A neural strategy for the inference of SH3 domain-peptide interaction specificity
Background: The SH3 domain family is one of the most representative and widely studied cases of so-called Peptide Recognition Modules (PRM). The polyproline II motif PxxP that gen...
Enrico Ferraro, Allegra Via, Gabriele Ausiello, Ma...