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BMCBI
2007
182views more  BMCBI 2007»
15 years 3 months ago
Identifying regulatory targets of cell cycle transcription factors using gene expression and ChIP-chip data
Background: ChIP-chip data, which indicate binding of transcription factors (TFs) to DNA regions in vivo, are widely used to reconstruct transcriptional regulatory networks. Howev...
Wei-Sheng Wu, Wen-Hsiung Li, Bor-Sen Chen
BMCBI
2004
144views more  BMCBI 2004»
15 years 3 months ago
PASBio: predicate-argument structures for event extraction in molecular biology
Background: The exploitation of information extraction (IE), a technology aiming to provide instances of structured representations from free-form text, has been rapidly growing w...
Tuangthong Wattarujeekrit, Parantu K. Shah, Nigel ...
149
Voted
BMCBI
2010
125views more  BMCBI 2010»
14 years 10 months ago
ProbFAST: Probabilistic Functional Analysis System Tool
Background: The post-genomic era has brought new challenges regarding the understanding of the organization and function of the human genome. Many of these challenges are centered...
Israel T. da Silva, Ricardo Z. N. Vêncio, Th...
259
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DNA
2011
Springer
227views Bioinformatics» more  DNA 2011»
14 years 3 months ago
Cooperative Assembly Systems
Several molecular systems form large-scale objects. One would like to understand their assembly and how this assembly is regulated. As a first step, we investigate the phase trans...
Vincent Danos, Heinz Koeppl, John Wilson-Kanamori
139
Voted
IMC
2009
ACM
15 years 10 months ago
Live streaming performance of the Zattoo network
A number of commercial peer-to-peer systems for live streaming, such as PPLive, Joost, LiveStation, SOPCast, TVants, etc. have been introduced in recent years. The behavior of the...
Hyunseok Chang, Sugih Jamin, Wenjie Wang