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BMCBI
2007
100views more  BMCBI 2007»
15 years 2 months ago
PARE: A tool for comparing protein abundance and mRNA expression data
Background: Techniques for measuring protein abundance are rapidly advancing and we are now in a situation where we anticipate many protein abundance data sets will be available i...
Eric Z. Yu, Anne E. Counterman Burba, Mark Gerstei...
BMCBI
2008
125views more  BMCBI 2008»
15 years 2 months ago
SynteBase/SynteView: a tool to visualize gene order conservation in prokaryotic genomes
Background: It has been repeatedly observed that gene order is rapidly lost in prokaryotic genomes. However, persistent synteny blocks are found when comparing more or less distan...
Frédéric Lemoine, Bernard Labedan, O...
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BMCBI
2007
180views more  BMCBI 2007»
15 years 1 months ago
Splicy: a web-based tool for the prediction of possible alternative splicing events from Affymetrix probeset data
Background: The Affymetrix™ technology is nowadays a well-established method for the analysis of gene expression profiles in cancer research studies. However, changes in gene ex...
Davide Rambaldi, Barbara Felice, Viviane Praz, Phi...
PODS
2006
ACM
88views Database» more  PODS 2006»
16 years 2 months ago
Structural characterizations of the semantics of XPath as navigation tool on a document
Given a document D in the form of an unordered labeled tree, we study the expressibility on D of various fragments of XPath, the core navigational language on XML documents. We gi...
Marc Gyssens, Jan Paredaens, Dirk Van Gucht, Georg...
AAAI
2000
15 years 3 months ago
The Systems Engineering Process Activities (SEPA) Methodology and Tool Suite
or cone, abstraction is chosen to represent a spectrum of user inputs/requirements that are narrowed, refined, and structured into a system design. User inputs require refinement f...
K. Suzanne Barber, Thomas J. Graser, Paul Grisham,...