Background: Since Swanson proposed the Undiscovered Public Knowledge (UPK) model, there have been many approaches to uncover UPK by mining the biomedical literature. These earlier...
The standardization of the second generation Web Ontology Language, OWL, leaves a crucial issue for Web-based ontologies unsatisfactorily resolved: how to represent and reason with...
The bio-ontology community falls into two camps: first we have biology domain experts, who actually hold the knowledge we wish to capture in ontologies; second, we have ontology s...
Background: Biomedical literature, e.g., MEDLINE, contains a wealth of knowledge regarding functions of proteins. Major recurring biological concepts within such text corpora repr...
Biomedical ontologies provide a commonly accepted scheme for the characterization of biological concepts that enable knowledge sharing and integration. Updating and maintaining an ...