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BMCBI
2005
152views more  BMCBI 2005»
15 years 4 months ago
An ant colony optimisation algorithm for the 2D and 3D hydrophobic polar protein folding problem
Background: The protein folding problem is a fundamental problems in computational molecular biology and biochemical physics. Various optimisation methods have been applied to for...
Alena Shmygelska, Holger H. Hoos
122
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CORR
2004
Springer
168views Education» more  CORR 2004»
15 years 3 months ago
Estimating Genome Reversal Distance by Genetic Algorithm
Sorting by reversals is an important problem in inferring the evolutionary relationship between two genomes. The problem of sorting unsigned permutation has been proven to be NP-ha...
Andy Auyeung, Ajith Abraham
LATA
2009
Springer
15 years 11 months ago
From Gene Trees to Species Trees through a Supertree Approach
Abstract. Gene trees are leaf-labeled trees inferred from molecular sequences. Due to duplication events arising in genome evolution, gene trees usually have multiple copies of som...
Celine Scornavacca, Vincent Berry, Vincent Ranwez
ESTIMEDIA
2009
Springer
15 years 10 months ago
System-level MP-SoC design space exploration using tree visualization
— The complexity of today’s embedded systems forces designers to model and simulate systems and their components to explore the wide range of design choices. Such design space ...
Toktam Taghavi, Andy D. Pimentel, Mark Thompson
GECCO
2007
Springer
154views Optimization» more  GECCO 2007»
15 years 10 months ago
A multi-objective approach to search-based test data generation
There has been a considerable body of work on search–based test data generation for branch coverage. However, hitherto, there has been no work on multi–objective branch covera...
Kiran Lakhotia, Mark Harman, Phil McMinn