Sciweavers

92 search results - page 16 / 19
» Bacterial computing
Sort
View
ISMB
2008
15 years 5 days ago
Classification of arrayCGH data using fused SVM
Motivation: Array-based comparative genomic hybridization (arrayCGH) has recently become a popular tool to identify DNA copy number variations along the genome. These profiles are...
Franck Rapaport, Emmanuel Barillot, Jean-Philippe ...
WOB
2003
129views Bioinformatics» more  WOB 2003»
14 years 11 months ago
Procsimo: uma Ferramenta de Procura de Similaridade entre Operons
In this work, we propose a software tool, called PROCSIMO, which aims the identification of similarities between operons in bacterial genomes. From a database which contains the ch...
Carlos Azevedo, Alexandre Plastino, Ana Tereza R. ...
BMCBI
2006
145views more  BMCBI 2006»
14 years 10 months ago
GEM System: automatic prototyping of cell-wide metabolic pathway models from genomes
Background: Successful realization of a "systems biology" approach to analyzing cells is a grand challenge for our understanding of life. However, current modeling appro...
Kazuharu Arakawa, Yohei Yamada, Kosaku Shinoda, Yo...
BMCBI
2006
101views more  BMCBI 2006»
14 years 10 months ago
How repetitive are genomes?
Background: Genome sequences vary strongly in their repetitiveness and the causes for this are still debated. Here we propose a novel measure of genome repetitiveness, the index o...
Bernhard Haubold, Thomas Wiehe
COCOON
2005
Springer
15 years 3 months ago
RIATA-HGT: A Fast and Accurate Heuristic for Reconstructing Horizontal Gene Transfer
Horizontal gene transfer (HGT) plays a major role in microbial genome diversification, and is claimed to be rampant among various groups of genes in bacteria. Further, HGT is a ma...
Luay Nakhleh, Derek A. Ruths, Li-San Wang