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BMCBI
2006
139views more  BMCBI 2006»
14 years 12 months ago
Improvement in accuracy of multiple sequence alignment using novel group-to-group sequence alignment algorithm with piecewise li
Background: Multiple sequence alignment (MSA) is a useful tool in bioinformatics. Although many MSA algorithms have been developed, there is still room for improvement in accuracy...
Shinsuke Yamada, Osamu Gotoh, Hayato Yamana
BMCBI
2006
137views more  BMCBI 2006»
14 years 12 months ago
Bounded search for de novo identification of degenerate cis-regulatory elements
Background: The identification of statistically overrepresented sequences in the upstream regions of coregulated genes should theoretically permit the identification of potential ...
Jonathan M. Carlson, Arijit Chakravarty, Radhika S...
DATAMINE
2006
127views more  DATAMINE 2006»
14 years 11 months ago
Computing LTS Regression for Large Data Sets
Least trimmed squares (LTS) regression is based on the subset of h cases (out of n) whose least squares t possesses the smallest sum of squared residuals. The coverage h may be se...
Peter Rousseeuw, Katrien van Driessen
JMLR
2008
100views more  JMLR 2008»
14 years 11 months ago
Hit Miss Networks with Applications to Instance Selection
In supervised learning, a training set consisting of labeled instances is used by a learning algorithm for generating a model (classifier) that is subsequently employed for decidi...
Elena Marchiori
JMLR
2008
168views more  JMLR 2008»
14 years 11 months ago
Max-margin Classification of Data with Absent Features
We consider the problem of learning classifiers in structured domains, where some objects have a subset of features that are inherently absent due to complex relationships between...
Gal Chechik, Geremy Heitz, Gal Elidan, Pieter Abbe...