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» BatchPrimer3: A high throughput web application for PCR and ...
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BMCBI
2008
191views more  BMCBI 2008»
13 years 4 months ago
BatchPrimer3: A high throughput web application for PCR and sequencing primer design
Background: Microsatellite (simple sequence repeat
Frank M. You, Naxin Huo, Yong Qiang Gu, Ming-Cheng...
BMCBI
2007
89views more  BMCBI 2007»
13 years 6 months ago
Primique: automatic design of specific PCR primers for each sequence in a family
Background: In many contexts, researchers need specific primers for all sequences in a family such that each primer set amplifies only its target sequence and none of the others, ...
Jakob Fredslund, Mette Lange
BMCBI
2008
166views more  BMCBI 2008»
13 years 4 months ago
QuantPrime - a flexible tool for reliable high-throughput primer design for quantitative PCR
Background: Medium- to large-scale expression profiling using quantitative polymerase chain reaction (qPCR) assays are becoming increasingly important in genomics research. A majo...
Samuel Arvidsson, Miroslaw Kwasniewski, Diego Maur...
BMCBI
2010
116views more  BMCBI 2010»
13 years 6 months ago
SEQADAPT: an adaptable system for the tracking, storage and analysis of high throughput sequencing experiments
Background: High throughput sequencing has become an increasingly important tool for biological research. However, the existing software systems for managing and processing these ...
David B. Burdick, Christopher C. Cavnor, Jeremy Ha...
BMCBI
2011
12 years 9 months ago
CLOTU: An online pipeline for processing and clustering of 454 amplicon reads into OTUs followed by taxonomic annotation
Background: The implementation of high throughput sequencing for exploring biodiversity poses high demands on bioinformatics applications for automated data processing. Here we in...
Surendra Kumar, Tor Carlsen, Bjørn-Helge Me...