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» Bayesian Networks Learning for Gene Expression Datasets
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BMCBI
2007
197views more  BMCBI 2007»
14 years 12 months ago
Boolean networks using the chi-square test for inferring large-scale gene regulatory networks
Background: Boolean network (BN) modeling is a commonly used method for constructing gene regulatory networks from time series microarray data. However, its major drawback is that...
Haseong Kim, Jae K. Lee, Taesung Park
UAI
2001
15 years 1 months ago
Improved learning of Bayesian networks
The search space of Bayesian Network structures is usually defined as Acyclic Directed Graphs (DAGs) and the search is done by local transformations of DAGs. But the space of Baye...
Tomás Kocka, Robert Castelo
IDA
2003
Springer
15 years 5 months ago
Learning Dynamic Bayesian Networks from Multivariate Time Series with Changing Dependencies
Abstract. Many examples exist of multivariate time series where dependencies between variables change over time. If these changing dependencies are not taken into account, any mode...
Allan Tucker, Xiaohui Liu
TCBB
2011
14 years 6 months ago
Learning Genetic Regulatory Network Connectivity from Time Series Data
Recent experimental advances facilitate the collection of time series data that indicate which genes in a cell are expressed. This paper proposes an efficient method to generate th...
Nathan A. Barker, Chris J. Myers, Hiroyuki Kuwahar...
BMCBI
2008
128views more  BMCBI 2008»
14 years 12 months ago
Meta-analysis of breast cancer microarray studies in conjunction with conserved cis-elements suggest patterns for coordinate reg
Background: Gene expression measurements from breast cancer (BrCa) tumors are established clinical predictive tools to identify tumor subtypes, identify patients showing poor/good...
David D. Smith, Pål Sætrom, Ola R. Sn&...