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JCP
2008
121views more  JCP 2008»
14 years 9 months ago
Towards Design Space Exploration for Biological Systems
For both embedded systems and biological cell systems, design is a feature that defines their identity. The assembly of different components in designs of both systems can vary wid...
Simon Polstra, Tessa E. Pronk, Andy D. Pimentel, T...
88
Voted
BMCBI
2004
113views more  BMCBI 2004»
14 years 9 months ago
Oligo kernels for datamining on biological sequences: a case study on prokaryotic translation initiation sites
Background: Kernel-based learning algorithms are among the most advanced machine learning methods and have been successfully applied to a variety of sequence classification tasks ...
Peter Meinicke, Maike Tech, Burkhard Morgenstern, ...
BMCBI
2005
122views more  BMCBI 2005»
14 years 9 months ago
Bayesian coestimation of phylogeny and sequence alignment
Background: Two central problems in computational biology are the determination of the alignment and phylogeny of a set of biological sequences. The traditional approach to this p...
Gerton Lunter, István Miklós, Alexei...
75
Voted
FLAIRS
2003
14 years 11 months ago
An Extension of the Differential Approach for Bayesian Network Inference to Dynamic Bayesian Networks
We extend the differential approach to inference in Bayesian networks (BNs) (Darwiche, 2000) to handle specific problems that arise in the context of dynamic Bayesian networks (D...
Boris Brandherm
GECCO
2006
Springer
133views Optimization» more  GECCO 2006»
15 years 1 months ago
String transformation-based Bayesian classification or proteins
We describe a Markov chain Bayesian classification tool, SCS, that can perform data-driven classification of proteins and protein segments. Training data for interesting classific...
Timothy Meekhof, Gary W. Daughdrill, Robert B. Hec...