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BMCBI
2005
121views more  BMCBI 2005»
14 years 9 months ago
Automated methods of predicting the function of biological sequences using GO and BLAST
Background: With the exponential increase in genomic sequence data there is a need to develop automated approaches to deducing the biological functions of novel sequences with hig...
Craig E. Jones, Ute Baumann, Alfred L. Brown
BMCBI
2006
137views more  BMCBI 2006»
14 years 9 months ago
Chaos game representation for comparison of whole genomes
Background: Chaos game representation of genome sequences has been used for visual representation of genome sequence patterns as well as alignment-free comparisons of sequences ba...
Jijoy Joseph, Roschen Sasikumar
SEMWEB
2007
Springer
15 years 3 months ago
OWL-CM: OWL Combining Matcher based on Belief Functions Theory
In this paper we propose a new tool called OWL-CM (OWL Combining Matcher) that deals with uncertainty inherent to ontology mapping process. On the one hand, OWL-CM uses the techniq...
Boutheina Ben Yaghlane, Najoua Laamari
BMCBI
2006
129views more  BMCBI 2006»
14 years 9 months ago
EGenBio: A Data Management System for Evolutionary Genomics and Biodiversity
Background: Evolutionary genomics requires management and filtering of large numbers of diverse genomic sequences for accurate analysis and inference on evolutionary processes of ...
Laila A. Nahum, Matthew T. Reynolds, Zhengyuan O. ...
BMCBI
2008
117views more  BMCBI 2008»
14 years 10 months ago
RNACompress: Grammar-based compression and informational complexity measurement of RNA secondary structure
Background: With the rapid emergence of RNA databases and newly identified non-coding RNAs, an efficient compression algorithm for RNA sequence and structural information is neede...
Qi Liu, Yu Yang, Chun Chen, Jiajun Bu, Yin Zhang, ...