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89
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BMCBI
2010
154views more  BMCBI 2010»
14 years 10 months ago
Motif Enrichment Analysis: a unified framework and an evaluation on ChIP data
Background: A major goal of molecular biology is determining the mechanisms that control the transcription of genes. Motif Enrichment Analysis (MEA) seeks to determine which DNA-b...
Robert C. McLeay, Timothy L. Bailey
BMCBI
2005
292views more  BMCBI 2005»
14 years 10 months ago
Atlas - a data warehouse for integrative bioinformatics
Background: We present a biological data warehouse called Atlas that locally stores and integrates biological sequences, molecular interactions, homology information, functional a...
Sohrab P. Shah, Yong Huang, Tao Xu, Macaire M. S. ...
EDBT
2009
ACM
136views Database» more  EDBT 2009»
15 years 5 months ago
On the comparison of microdata disclosure control algorithms
Privacy models such as k-anonymity and -diversity typically offer an aggregate or scalar notion of the privacy property that holds collectively on the entire anonymized data set....
Rinku Dewri, Indrajit Ray, Indrakshi Ray, Darrell ...
62
Voted
CGO
2006
IEEE
15 years 4 months ago
Region Monitoring for Local Phase Detection in Dynamic Optimization Systems
Dynamic optimization relies on phase detection for two important functions (1) To detect change in code working set and (2) To detect change in performance characteristics that ca...
Abhinav Das, Jiwei Lu, Wei-Chung Hsu
81
Voted
CSL
2010
Springer
14 years 11 months ago
Fibrational Induction Rules for Initial Algebras
This paper provides an induction rule that can be used to prove properties of data structures whose types are inductive, i.e., are carriers of initial algebras of functors. Our res...
Neil Ghani, Patricia Johann, Clément Fumex