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» Binding as sets of scopes
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110
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BMCBI
2008
134views more  BMCBI 2008»
15 years 16 days ago
Prediction of protein-protein binding site by using core interface residue and support vector machine
Background: The prediction of protein-protein binding site can provide structural annotation to the protein interaction data from proteomics studies. This is very important for th...
Nan Li, Zhonghua Sun, Fan Jiang
108
Voted
PPOPP
2010
ACM
15 years 7 months ago
Thread to strand binding of parallel network applications in massive multi-threaded systems
In processors with several levels of hardware resource sharing, like CMPs in which each core is an SMT, the scheduling process becomes more complex than in processors with a singl...
Petar Radojkovic, Vladimir Cakarevic, Javier Verd&...
129
Voted
IJCNN
2006
IEEE
15 years 6 months ago
An optimization approach to achieve unsupervised segmentation and binding in a dynamical network
— We present a novel network of oscillatory units, whose behavior is described by the amplitude and phase of oscillations. While building on previous work, the system presented i...
A. Ravishankar Rao, Guillermo A. Cecchi, Charles C...
CSB
2005
IEEE
125views Bioinformatics» more  CSB 2005»
15 years 6 months ago
Discriminative Discovery of Transcription Factor Binding Sites from Location Data
Motivation: The availability of genome-wide location analyses based on chromatin immunoprecipitation (ChIP) data gives a new insight for in silico analysis of transcriptional regu...
Yuji Kawada, Yasubumi Sakakibara
RECOMB
2007
Springer
16 years 22 days ago
Design of Compact, Universal DNA Microarrays for Protein Binding Microarray Experiments
Our group has recently developed a compact, universal protein binding microarray (PBM) that can be used to determine the binding preferences of transcription factors (TFs) [1]. Thi...
Anthony A. Philippakis, Aaron M. Qureshi, Michael ...