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» Binding as sets of scopes
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CCGRID
2005
IEEE
15 years 6 months ago
Efficient resource description and high quality selection for virtual grids
Simple resource specification, resource selection, and effective binding are critical capabilities for Grid middleware. We the Virtual Grid, an abstraction for dynamic grid applic...
Yang-Suk Kee, D. Logothetis, Richard Y. Huang, Hen...
133
Voted
APBC
2008
231views Bioinformatics» more  APBC 2008»
15 years 1 months ago
Optimal Algorithm for Finding DNA Motifs with Nucleotide Adjacent Dependency
: Finding motifs and the corresponding binding sites is a critical and challenging problem in studying the process of gene expression. String and matrix representations are two pop...
Francis Y. L. Chin, Henry C. M. Leung, Man-Hung Si...
112
Voted
BMCBI
2006
156views more  BMCBI 2006»
15 years 16 days ago
Detecting the limits of regulatory element conservation and divergence estimation using pairwise and multiple alignments
Background: Molecular evolutionary studies of noncoding sequences rely on multiple alignments. Yet how multiple alignment accuracy varies across sequence types, tree topologies, d...
Daniel A. Pollard, Alan M. Moses, Venky N. Iyer, M...
BMCBI
2007
115views more  BMCBI 2007»
15 years 14 days ago
Local comparison of protein structures highlights cases of convergent evolution in analogous functional sites
Background: We performed an exhaustive search for local structural similarities in an ensemble of non-redundant protein functional sites. With the purpose of finding new examples ...
Gabriele Ausiello, Daniele Peluso, Allegra Via, Ma...
BMCBI
2005
118views more  BMCBI 2005»
15 years 11 days ago
Variation in structural location and amino acid conservation of functional sites in protein domain families
Background: The functional sites of a protein present important information for determining its cellular function and are fundamental in drug design. Accordingly, accurate methods...
Birgit Pils, Richard R. Copley, Jörg Schultz