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» Bioinformatics software for biologists in the genomics era
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BMCBI
2010
163views more  BMCBI 2010»
14 years 9 months ago
DraGnET: Software for storing, managing and analyzing annotated draft genome sequence data
Background: New "next generation" DNA sequencing technologies offer individual researchers the ability to rapidly generate large amounts of genome sequence data at drama...
Stacy Duncan, Ruchita Sirkanungo, Leslie Miller, G...
BMCBI
2008
152views more  BMCBI 2008»
14 years 9 months ago
JCoast - A biologist-centric software tool for data mining and comparison of prokaryotic (meta)genomes
Background: Current sequencing technologies give access to sequence information for genomes and metagenomes at a tremendous speed. Subsequent data processing is mainly performed b...
Michael Richter, Thierry Lombardot, Ivaylo Kostadi...
NAR
2000
172views more  NAR 2000»
14 years 9 months ago
The Molecular Biology Database Collection: an online compilation of relevant database resources
The Molecular Biology Database Collection represents an effort geared at making molecular biology database resources more accessible to biologists. This online resource, available...
Andreas D. Baxevanis
BIBE
2007
IEEE
127views Bioinformatics» more  BIBE 2007»
15 years 3 months ago
A Heuristic for Phylogenetic Reconstruction Using Transposition
Abstract—Because of the advent of high-throughput sequencing and the consequent reduction in cost of sequencing, many organisms have been completely sequenced and most of their g...
Feng Yue, Meng Zhang, Jijun Tang
BMCBI
2006
116views more  BMCBI 2006»
14 years 9 months ago
MICA: desktop software for comprehensive searching of DNA databases
Background: Molecular biologists work with DNA databases that often include entire genomes. A common requirement is to search a DNA database to find exact matches for a nondegener...
William A. Stokes, Benjamin S. Glick