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BIOCOMP
2006
15 years 4 months ago
Polyome: A Learning System for Extracting Bioinformatic Data
: The exponential growth in the quantity of publicly available genetic data and the proliferation of bioinformatic databases mean that scientists need computerized tools more than ...
Bob Myers, Trevor I. Dix, Ross L. Coppel, David G....
BMCBI
2011
14 years 10 months ago
A lightweight, flow-based toolkit for parallel and distributed bioinformatics pipelines
Background: Bioinformatic analyses typically proceed as chains of data-processing tasks. A pipeline, or ‘workflow’, is a well-defined protocol, with a specific structure defin...
Marcin Cieslik, Cameron Mura
HPCS
2005
IEEE
15 years 8 months ago
A Lightweight, Scalable Grid Computing Framework for Parallel Bioinformatics Applications
Abstract— In recent years our society has witnessed an unprecedented growth in computing power available to tackle important problems in science, engineering and medicine. For ex...
Hans De Sterck, Rob S. Markel, Rob Knight
ISMB
2000
15 years 4 months ago
An Evaluation of Ontology Exchange Languages for Bioinformatics
Ontologies are specifications of the concepts in a given field, and of the relationships among those concepts. The development of ontologies for molecular-biology information and ...
Robin McEntire, Peter D. Karp, Neil F. Abernethy, ...
HPDC
2010
IEEE
15 years 4 months ago
Data parallelism in bioinformatics workflows using Hydra
Large scale bioinformatics experiments are usually composed by a set of data flows generated by a chain of activities (programs or services) that may be modeled as scientific work...
Fábio Coutinho, Eduardo S. Ogasawara, Danie...