The MPI Bioinformatics Toolkit is an interactive web service which offers access to a great variety of public and in-house bioinformatics tools. They are grouped into different se...
Andreas Biegert, Christian Mayer, Michael Remmert,...
We describe a data-centric software architecture for bioinformatics workflows and a rule-based workflow enactment system that uses declarative specifications of data dependences be...
Abstract— Our approach to the model-driven collaborative design of workflows for bioinformatic applications uses the jABC [6] for model driven mediation and choreography to comp...
Tiziana Margaria, Christian Kubczak, Marc Njoku, B...
Abstract. Parallel program design patterns provide users a new way to get parallel programs without much effort. However, it is always a serious limitation for most existing parall...
This review summarizes important work in open-source bioinformatics software that has occurred over the past couple of years. The survey is intended to illustrate how programs and...