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JIB
2006
67views more  JIB 2006»
15 years 3 months ago
The implications for Bioinformatics of integration across physical scales
Bioinformatics blossomed with research developments in molecular biology. But as the focus of research moves back up the physical scale to the biology of whole multicellular organ...
T. Charles Hodgman, Y. Ugartechea-Chirino, G. Tans...
FGCS
2007
108views more  FGCS 2007»
15 years 3 months ago
From bioinformatic web portals to semantically integrated Data Grid networks
We propose a semi-automated method for redeploying bioinformatic databases indexed in a Web portal as a decentralized, semantically integrated and service-oriented Data Grid. We g...
Adriana Budura, Philippe Cudré-Mauroux, Kar...
BMCBI
2005
120views more  BMCBI 2005»
15 years 3 months ago
A microarray study of MPP+-treated PC12 Cells: Mechanisms of toxicity (MOT) analysis using bioinformatics tools
Background: This paper describes a microarray study including data quality control, data analysis and the analysis of the mechanism of toxicity (MOT) induced by 1-methyl-4-phenylp...
Zengjun Xu, Tucker A. Patterson, Jonathan D. Wren,...
119
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MAGS
2007
100views more  MAGS 2007»
15 years 3 months ago
Engineering agent-mediated integration of bioinformatics analysis tools
Abstract. The availability of massive amounts of biological data, distributed in various data sources, has prompted the development of a wide range of data analysis tools. However,...
Vassilis Koutkias, Andigoni Malousi, Nicos Maglave...
135
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TCBB
2010
114views more  TCBB 2010»
15 years 1 months ago
Cache-Oblivious Dynamic Programming for Bioinformatics
— We present efficient cache-oblivious algorithms for some well-studied string problems in bioinformatics including the longest common subsequence, global pairwise sequence alig...
Rezaul Alam Chowdhury, Hai-son Le, Vijaya Ramachan...